New Ribozyme Can Make Rna Molecules Accessible for Click Chemistry in Living Cells
Published:26 Nov.2023    Source:University of Würzburg
RNA molecules are real all-rounders. They transfer the genetic information from the DNA in the cell. They regulate the activity of genes. And some of them have a catalytic effect: just like enzymes, they enable biochemical reactions that would be difficult or impossible to occur on their own. These special RNA molecules that accelerate such reactions are called ribozymes. The team of chemistry professor Claudia Höbartner from Julius-Maximilians-Universität (JMU) Würzburg now presents a newly discovered ribozyme called SAMURI.
 
SAMURI can precisely modify other RNA molecules. This ability is very helpful for RNA research: "We can use such ribozymes as tools to label RNA with dyes and make it visible," says JMU researcher Dr. Takumi Okuda. "In this way, the pathways of RNA in the cell and its interactions with other molecules can be studied even better." "We see new possible applications for ribozymes when the enzymes responsible for a specific task are missing or are no longer functional due to mutations," says Claudia Höbartner.
 
the new ribozyme SAMURI modifies other RNA molecules at a precisely defined site of a specific adenine. There it attaches molecules to which, in turn, dyes or other molecules can easily be clicked in -- like buckling up a seat belt. Such reactions are known as click chemistry. SAMURI also has the advantage that it is active under the same physiological conditions that prevail in living cells. Another special feature: SAMURI uses a new synthetic cofactor to make RNA molecules accessible for click chemistry. Claudia Höbartner's group next wants to elucidate the structure and mechanism of action of SAMURI. She also wants to develop further ribozymes that can modify RNA building blocks other than adenine.