CMB_2025 Vol.15

Table of Contents

Articles

Genome-Wide Identification and Analysis of Alternative Splicing in Aspergillus niger
Xiangjia Min<sup>1</sup>, 1 Department of Chemical and Biological Sciences, Youngstown State University, OH 44555<br> 2 Department of Computer Science, Information, and Engineering Technology, Youngstown State University, OH 44555, Courtney Jones<sup>1</sup>, Burrows Logan<sup>1</sup>, Maria Campean<sup>1</sup>, Bilal Wekhyan<sup>1</sup>, Chetan Dasana<sup>1</sup>, Aaryan Patel<sup>1</sup>, Pasan Mudiyanselage<sup>2</sup>, Kolade Adeyemo<sup>1</sup>, Feng Yu<sup>2</sup>
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Long-Term Evaluation of the Effects of An 'Internet Plus' Continuous Care Platform in Chronic Disease Management
Xiuli Ma, 1 Heart Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, 100020, China<br> 2 Nursing Department, The Sixth Medical Center,General Hospital of People’s Liberation Army, Beijing, 100048, China, Lingling Qin, Chunyue He, Yeli Huang
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Regulatory Networks in Potato Tuber Development
Shiying Yu, Biotechnology Research Center, Cuixi Academy of Biotechnology, Zhuji, 311800, China
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Transcriptional Networks in Rapeseed Development and Stress Responses
Xuelian Jiang, Institute of Life Science, Jiyang College of Zhejiang A&F University, Zhuji, 311800, Zhejiang, China, Xuming Lv, Yeping Han
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Green Application of Enzymatic and Ultrasound-Assisted Extraction Techniques for Cordyceps Polysaccharides
Wenzhong Huang, Biomass Research Center, Hainan Institute of Tropical Agricultural Resouces, Sanya, 572025, Hainan, China
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Genetic Regulation of Pigmentation in Brassica napus Flowers
Kaiwen Liang, Comprehensive Utilization Center, Hainan Institute of Tropical Agricultural Resouces, Sanya, 572025, Hainan, China
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Development and Market Prospect Analysis of Cordyceps Polysaccharides in the Pharmaceutical and Health Product Industries
Huixian Li, Jianhui Li, Institute of Life Sciences, Jiyang College of Zhejiang A&F University, Zhuji, 311800, Zhejiang, China
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The Molecular Mechanisms and Regulatory Network of the Accumulation of Leonurus japonicus Alkaloids
Jianli Zhong, Hainan Institute of Biotechnology, Haikou, 570206, Hainan, China
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Integrative Analysis of scRNA-seq and ATAC-seq for Cell Fate Determination
Hongpeng Wang, Minghua Li, Biotechnology Research Center, Cuixi Academy of Biotechnology, Zhuji, 311800, China
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Computational Prediction of Off-Target Effects in CRISPR Systems CRISPR
Wenzhong Huang, Biomass Research Center, Hainan Institute of Tropical Agricultural Resouces, Sanya, 572025, Hainan, China
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Deep Learning for Predicting Gene Expression from Genomic Sequences
Shiying Yu, Biotechnology Research Center, Cuixi Academy of Biotechnology, Zhuji, 311800, China
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Building an Integrated Multi-Omics Database for Rare Diseases
Huixian Li, Jingqiang Wang, Institute of Life Science, Jiyang College of Zhejiang A&F University, Zhuji, 311800, China
Genomic Biomarker Discovery for Drug Sensitivity Using Omics Data
Jiayi Wu, Keyan Fang, Traditional Chinese Medicine Research Center, Cuixi Academy of Biotechnology, Zhuji, 311800, China
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Pretrained Language Models for Biological Sequence Understanding
Haimei Wang, Hainan Institute of Biotechnology, Haikou, 570206, Hainan, China
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High-Performance Computing Pipelines for NGS Variant Calling
Wenzhong Huang, Biomass Research Center, Hainan Institute of Tropical Agricultural Resouces, Sanya, 572025, Hainan, China
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Large Language Models for Biological Knowledge Extraction
Hongpeng Wang, Minghua Li, Biotechnology Research Center, Cuixi Academy of Biotechnology, Zhuji, 311800, China
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Knowledge Graph Construction for Molecular Interaction Exploration
Wenzhong Huang, Biomass Research Center, Hainan Institute of Tropical Agricultural Resouces, Sanya, 572025, Hainan, China
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Computational Frameworks for Spatial Transcriptomics in Tumor Microenvironment
Jianhui Li, Institute of Life Science, Jiyang College of Zhejiang A&F University, Zhuji, 311800, China
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Mathematical Modeling of Synthetic Genetic Circuits
Haimei Wang, Hainan Institute of Biotechnology, Haikou, 570206, Hainan, China
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Standardizing Bioinformatics Pipelines for Clinical Genomics
Yuhong Huang, Traditional Chinese Medicine Research Center, Cuixi Academy of Biotechnology, Zhuji, 311800, China, Yufen Wang, Guangman Xu
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Machine Learning Approaches in Predicting Protein–Protein Interactions in Pathogenic Bacteria
Xing Zhao, Ming Li, Congbiao You, Tropical Microbial Resources Research Center, Hainan Institute of Tropical Agricultural Resources, Sanya, 572025, Hainan, China
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Genome-Wide Identification of Drought-Responsive miRNAs in Maize Using Deep Sequencing and Network Analysis
Jin Zhou, Minli Xu, Hainan Provincial Key Laboratory of Crop Molecular Breeding, Sanya, 572025, Hainan, China
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Integrating Multi-Omics Data to Explore the Genetic Basis of Milk Production in Dairy Cattle
Jingya Li, Jun Li, Animal Science Research Center, Cuixi Academy of Biotechnology, Zhuji, 311800, Zhejiang, China
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Case Study: Application of CRISPR Design Algorithms in Tomato Genome Editing
Dandan Huang, Hainan Institute of Biotechnology, Haikou, 570206, Hainan, China
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Computational Reconstruction of Disease-Associated Networks in Human Alzheimer's Pathogenesis
Jingqiang Wang, Institute of Life Science, Jiyang College of Zhejiang A&F University, Zhuji, 311800, China
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Advances in Computational Vaccinology: From Antigen Discovery to Immune Simulation
Shiying Yu, Biotechnology Research Center, Cuixi Academy of Biotechnology, Zhuji, 311800, China
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Genome Assembly and Comparative Genomics of a Novel Extremophilic Bacterium
Yinghua Chen, Institute of Life Science, Jiyang College of Zhejiang A&F University, Zhuji, 311800, Zhejiang, China, Hui Xiang, Zhongqi Wu
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Computational Modeling of Metabolic Networks in Rice Under Salt Stress
Xingzhu Feng, Hainan Institute of Biotechnology, Haikou, 570206, Hainan, China
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AI-Powered Prediction of Animal Disease Outbreaks Using Genomic Surveillance Data
Qiqi Zhou, Tropical Animal Resources Research Center, Hainan Institute of Tropical Agricultural Resources, Sanya, 572025, Hainan, China, Shiqiang Huang
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Case Study: Computational Detection of Horizontal Gene Transfer in Soil Microbiomes
Jun Wang, Microbial Resources Research Center, Cuixi Academy of Biotechnology, Zhuji, 311800, Zhejiang, China, Qikun Huang
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